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CONP / PCNOFollow

Canadian Open Neuroscience Platform (CONP) / Plateforme canadienne de neuroscience ouverte (PCNO). Generously supported by @BrainCanada and 33 global partners.

CONP / PCNO @NeuroLibre·

Zoha will be live-tweeting the days events for us - follow her to follow along with #OpenScienceInAction @TheNeuro_MNI

Zoha Deldar. PhD@Zoha_Deldar

So excited to be @TheNeuro_MNI on Monday, participate in this fantastic symposium on "The Neuro’s inaugural Open Science in Action," meeting friends and #learning about my favorite topic #openscience.

#LetsLearnHowToShare

@NeuroLibre
@TheNeuro_MNI
@DylanWRE
@LabScribbles

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HotPopRobot: Space, Robots, Machine Learning, AI @wonrobot·

Complexities of using Machine Learning (CNN, RNN, Hybrid) on Functional MRI (fMRI) scans of the brain. Big Challenges, Sparse public data.

Some learnings from hacking @BrainHackTo Krembil Centre for Neuroinformatics @CAMHResearch 13-15 Nov https://hotpoprobot.com/2019/11/17/brainhack-toronto-2019-complexities-of-using-machine-learning-on-functional-mri-scans-some-learnings/ @brainhackorg

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The Neuro @TheNeuro_MNI·

Today is #FollowFriday! Follow our Twitter Ambassadors on Monday, November 18 for their live take on the #OpenScienceinAction Symposium!

Elizabeth DuPre: @emdupre_
Adrien Peyrache: @apeyrache
Blake Richards: @tyrell_turing
Dylan Roskams-Edris: @DylanWRE

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Tom Schonberg @tschonberg·

Ever wondered what would happen if 70 different groups analyzed the same fMRI dataset? The pre-print of our http://NARPS.info project is out https://www.biorxiv.org/content/10.1101/843193v1 ! @russpoldrack @rotembot @flxhlzmstr @CFCamerer @ten_photos 1/9

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CONP / PCNO @NeuroLibre·

The CAMH of Toronto (@endstigma) will be hosting the Nexus Workshop 2019.

Date(s) - 21/11/2019 - 22/11/2019

More information: http://bit.ly/2MOjasi

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BrainhackWestern2019 @brainhackUWO19·

Aaand Brainhack 2019 at UWO has officially kicked off!! Remember to tag #brainhackuwo19 to your tweets so we can retweet! :) @NeuroLibre @Brains_CAN

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Brain Hack Toronto @BrainHackTO·

We're starting #BrainHackTO #bhg19 with opening remarks from @edickie! Beginning with a thank you to our sponsors @rotmanresearch @CABHI__ @UofT @OntarioBrain @NeuroLibre Women in AI and ML, and Opereason Analytics, and to Krembil Centre for Neuroinformatics for the space!

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Jessica Royer @J_Royer_·

The result of a great team effort: @CaseyPaquola @saratheriver @reindervosdwael @alexlowe_77 @oualid_benkarim @acehigh1952 @danilobzdok @the_mindwanders @BorisBernhardt & non-tweeters @NeuroLibre @TheNeuro_MNI [2/2]

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The Neuro @TheNeuro_MNI·

Can't make it to our #OpenScience Symposium?

Watch LIVE from the Jeanne Timmins Amphitheatre at 🔗 https://at.theneuro.ca/OSJTA on Monday, November 18 from 8:30 a.m. to 6:00 p.m. and join the conversation online using 👉 #OpenScienceinAction!

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CONP / PCNO @NeuroLibre·

Registration has opened for BrainHack Toronto (@BrainHackTO)!
The theme is Individuality in the Age of Big NeuroData.

Join us on November 13-15 at the Krembil Centre for Neuroinformatics for hacking, education, panels, and networking. http://bit.ly/2JnGFXg

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CONP / PCNO @NeuroLibre·

"Open Science in Action: Inaugural Symposium"

We welcome you to engage and exchange around #OpenScience in action at The Neuro and beyond.

Date: Nov 18 @TheNeuro_MNI

Information and registration: http://bit.ly/2BFBw8D

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BrainhackWestern2019 @brainhackUWO19·

One week to Brainhack2019!! Check out some of our pitched projects here: https://github.com/BrainhackWestern/BrainhackWestern.github.io/wiki/projects and remember it's not too late to pitch a your own ideas!
See you next week!! 😄🧠👩‍💻 @NeuroLibre @Brains_CAN @BMI_WesternU #cantcontainourexcitement

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CONP / PCNO @NeuroLibre·

"Open Science in Action: Inaugural Symposium"

We welcome you to engage and exchange around #OpenScience in action at The Neuro and beyond.

Date: Nov 18 @TheNeuro_MNI

Information and registration: http://bit.ly/2BFBw8D

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CONP / PCNO @NeuroLibre·

@brainhackorg @brainhackUWO19 @brainhackorg rassemble des chercheurs avec des expertises variées pour des collaborations sur des projets scientifiques en #neuroimagerie et en #neurosciences.

Pour plus d’informations et vous inscrire à BrainHack Western 2019:
http://bit.ly/348UUXT
#ScienceOuverte

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CONP / PCNO @NeuroLibre·

Registration has opened for BrainHack Toronto (@BrainHackTO)!
The theme is Individuality in the Age of Big NeuroData.

Join us on November 13-15 at the Krembil Centre for Neuroinformatics for hacking, education, panels, and networking. http://bit.ly/2JnGFXg

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Brainhack @brainhackorg·

@pierre_bellec @NeuroLibre @brainhackUWO19 @TristanGlatard @emdupre_ @ErinWDickie Here is the Brainhack Toronto @BrainHackTO on 13th-15th November! For more information 👉https://brainhackto.github.io/Global-Toronto-11-2019/

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Pierre Bellec @pierre_bellec·

Don't forget to submit your proposal for educational sessions for the next @OHBM meeting by October 30th. Deadline is fast approaching!! https://www.humanbrainmapping.org/i4a/pages/index.cfm?pageid=3948

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BrainhackWestern2019 @brainhackUWO19·

📢 Brainhack announcement 📢 check out https://github.com/BrainhackWestern/BrainhackWestern.github.io/wiki/projects if you have a pitch you would like to propose for Brainhack! @Brains_CAN @NeuroLibre @BMI_WesternU #brainhackuwo

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Pierre Bellec @pierre_bellec·

over the month of August this year, we ran the second and last pilot of a 4 weeks long, project-based summer school in neural data science, distributed (and credited) at 4 Montreal universities. @NeuroLibre just published a recap of #brainhack school https://conp.ca/brainhack-school-in-a-class-of-its-own/

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CONP / PCNO @NeuroLibre·

BrainHack School allows students to live a true immersion in neuroinformatics while working on their own project and earning course credits! To learn more, read our article that's now available in English: http://bit.ly/2p06XHX

#OpenScience
#Neuroinformatics
#Training

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Elizabeth DuPre @emdupre_·

Love #MachineLearning and neuroimaging ? Check out the newest ✨ alpha release ✨ of #nilearn !

Grab it with `pip install nilearn==0.6.0a0` and give us feedback 🗣️ to help make the official release even more amazing

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CONP / PCNO @NeuroLibre·

Come to visit Michael Xiao’s (@michaelxiao86) poster on "Automated alignment and segmentation of mouse mesoscale brain images using machine learning" #SfN19
Presentation Time: Tue, Oct. 22 from 10:00-11:00
Session Title: Computational Tools for Brain Experiments
Poster #:DD31

CONP / PCNO@NeuroLibre

Michael Xiao is a recipient of the CONP Scholar Award 2019. @michaelxiao86 is researching movement disorders @UBC. He aims to establish open-source databases of event-triggered functional maps for sharing data and tools. http://bit.ly/2YU99xo

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CONP / PCNO @NeuroLibre·

@waltyelnats Olivia (@waltyelnats) will also be presenting at the Trainee Professional Development Awards Poster session on Sat from 18:30-20:30.

#SfN19
#OpenScience
#CONP
#OpenData

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CONP / PCNO @NeuroLibre·

Headed to #SfN19?
Come check out Olivia Stanley’s (@waltyelnats) poster on "phase-based macrovascular filtering from gradient echo BOLD fMRI reduces orientation dependence"!

Presentation Time: Sat from 16:00-17:00.
Session Title: Connectomics Analytics II
Poster #: BB63 https://twitter.com/NeuroLibre/status/1160916340623978496

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CONP / PCNO @NeuroLibre·

Headed to #SfN19?
Come check out Olivia Stanley’s (@waltyelnats) poster on "phase-based macrovascular filtering from gradient echo BOLD fMRI reduces orientation dependence"!

Presentation Time: Sat from 16:00-17:00.
Session Title: Connectomics Analytics II
Poster #: BB63

CONP / PCNO@NeuroLibre

Olivia Stanley is a recipient of the CONP Student Scholar Program 2019. @waltyelnats is a Ph.D. student in Medical Biophysics @WesternU. Her project is to design a software platform allowing for easy inclusion of phase data in fMRI analysis. http://bit.ly/2KicVvq

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CONP / PCNO @NeuroLibre·

L'école BrainHack permet aux étudiants d'acquérir des connaissances poussées en neuroinformatique tout en avançant leur propre projet et en obtenant des crédits universitaires! Pour plus d'informations et des témoignages: http://bit.ly/33AW8uv

(English version to come)

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Brain Canada @BrainCanada·

Our Senior Program Manager toured Sheena Josselyn's lab. We are proud to support Sheena through the Brain Canada @CIFAR_News Partnered Initiative on Brain, Mind & Consciousness, & Alexander Jacob (@neurochatter) through the Canadian Open Neuroscience Platform (@NeuroLibre).

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The Neuro @TheNeuro_MNI·

Our partner in #openscience, @thesgconline, is helping establish one of two new Alzheimer's research centres as part of a $73M investment in open drug discovery by @NIH. https://www.thesgc.org/news/national-institute-aging-awards-73-million-new-alzheimer%E2%80%99s-drug-discovery-centers

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BrainhackWestern2019 @brainhackUWO19·

6 weeks to Brainhack 2019! Don't forget to register at https://brainhackwestern.github.io/ and apply for our travel award if you are travelling within Canada to attend! 🧠 #brainhackuwo2019 @Brains_CAN @NeuroLibre @BMI_WesternU @WesternU

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Zoha Deldar. PhD @Zoha_Deldar·

Happy #InternationalPodcastDay to my favorite podcasts:

1. @NeuroLibre: Canadian Open Neuroscience Platform
https://conp.ca/media/

2. @HiddenBrain:
I enjoyed listening to The Empathy Gym by @zakijam
https://www.npr.org/2019/07/22/744195502/you-2-0-the-empathy-gym

3. @fourbeerspod
#Podcastaddiction
#Treatyourears

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Sylvia Villeneuve @sylv_villeneuve·

thanks @NeuroLibre for making this possible! While needed, providing data open (in addition of collecting them!) requires a lot of time and resources. https://twitter.com/NeuroLibre/status/1177667109347844098

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CONP / PCNO @NeuroLibre·

In case you missed it, here is our article detailing the process of sharing the @prevent_ad dataset co-directed by @sylv_villeneuve: http://bit.ly/2mt7Wi6
Sharing data allows scientists to #reuse #bigdata so they can focus on making more #findings!
#openscience #opendata

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Kathryn Manning @kat_y_manning·

The Western University annual BrainHack is offering full travel awards this year! https://brainhackwestern.github.io @UCalgary @UofC_MRI4Kids @UofCr4kids @UCalgaryMed @BMI_WesternU @WesternU @NeuroLibre Please RT!

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Kathryn Manning @kat_y_manning·

Missed this - congrats @waltyelnats ! https://twitter.com/NeuroLibre/status/1160916340623978496

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StoP-AD Center @prevent_ad·

Learn more about the #PREVENTAD initiative, how its dataset came to be open and the difficulties in reaching this important objective. Solving #AD is a tremendous challenge and data sharing is key to the fight against this terrible disease. #endALZ https://twitter.com/NeuroLibre/status/1176171701811519490

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CONP / PCNO @NeuroLibre·

Nous venons tout juste de publier un article décrivant le processus de partage du jeu de données de @prevent_ad à la communauté scientifique pour favoriser les #découvertes sur #Alzheimer! Cliquez ici pour savoir plus : http://bit.ly/2mwOYao

#scienceouverte #donneesouvertes

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CONP / PCNO @NeuroLibre·

We just published an article describing the process of making the impressive @prevent_ad dataset open to the scientific community in order to foster further #discoveries on #Alzheimers! Click here to learn more: http://bit.ly/2mt7Wi6

#openscience #opendata

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damien chalaud @dchalaud·

SAVE-THE-DATE: Join us for our #OpenScience in Action Symposium @TheNeuro_MNI in Montreal on Monday, November 18, 2019! @FRQS1 @Montreal_InVivo @CIFAR_News @BrainCanada @CIHR_IRSC @KirstyDuncanMP

Sign up to be notified as soon as registration opens: https://at.theneuro.ca/2lH3igh

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BrainhackWestern2019 @brainhackUWO19·

Now that registration is open, it's time to get excited for Brainhack!! @Brains_CAN @NeuroLibre #brainhack2019

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The Neuro @TheNeuro_MNI·

🗓️SAVE-THE-DATE: Join us for our FREE #OpenScience in Action Symposium on Monday, November 18, 2019!

Sign up to be notified as soon as registration opens: https://at.theneuro.ca/2lH3igh

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Kirstie Whitaker @kirstie_j·

Our last talk of the session on the future of academic publishing is Samir Daas showcasing the Canadian Open Neuroscience Platform @NeuroLibre #NI2019 #neuroinformagical

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Helena @Helena_LB·

Up next at #NI2019: Samir Das from @TheNeuro_MNI, talking about @NeuroLibre, #OpenScience, and much more.

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Helena @Helena_LB·

Excellent line-up for the #NI2019 panel on the future of publishing: Agathe Morin (@FrontiersIn), @vickyhellon, @npscience, @Anitabandrowski, @francesskinner, and Samir Das (@neurolibre/@TheNeuro_MNI).

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Scholastica @scholasticahq·

The Canadian Open Neuroscience Platform: Catching Up to Plan S and Going Further - https://bit.ly/2KRNxvK @NeuroLibre

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IEEE Brain @IEEEBrain·

Have you heard of the #Canadian Open #Neuroscience Platform (@NeuroLibre)? If not, now's the time to check it out. It's quickly catching up to #Europe's #PlanS...and then some. Check out the latest update over at @PLOS: https://bit.ly/2KLsMlr #brain

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aled edwards @aledmedwards·

@PLOS @PLOSBlogs @DylanWRE @Stikov @NeuroLibre Though sharing papers & data are key to #openscience, @thesgconline & @TheNeuro_MNI are keen to remind that without also openly sharing materials and reagents, no one can reproduce or build on the experiments. Reagents are the IP of institutions, and often are not shared freely.

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Nikola Stikov @Stikov·

Our @plosblogs write-up on the future of open publishing can be found here 1/4

https://blogs.plos.org/plos/2019/08/the-canadian-open-neuroscience-platform-catching-up-to-plan-s-and-going-further/ https://twitter.com/PLOS/status/1162035377894350849

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Dylan Roskams-Edris @DylanWRE·

The PLOS blog just posted a piece I wrote with @Stikov and JB Poline about #openscience, @NeuroLibre, and the what we need to do to make sharing research resources a reality.

Open is the future; I know it in my bones.

Let's make it happen.

#openresearch #openpublishing https://twitter.com/PLOS/status/1162035377894350849

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Great read @plosblogs by our neighbors to the north! 🍁🍁🇨🇦

Co-authors @DylanWRE, @Stikov, and Jean-Baptiste Poline, working with @NeuroLibre, explain why we need to go beyond Plan S and #openpublishing if we want to realize the full potential of #openscience and #openresearch.

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CONP / PCNO @NeuroLibre·

Alexander Jacob is a recipient of the CONP Student Scholar Program 2019. @neurochatter is a PhD student in Psychology @uoft, currently working to develop new open-source tools for brain activity imaging in animals. http://bit.ly/31dxejo

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CONP / PCNO @NeuroLibre·

Dwight Newton is a recipient of the CONP Student Scholar Program 2019. He is doing his PhD in Pharmacology @uoft focused on better understanding the neurobiology of psychiatric disorders, with a focus on depression. http://bit.ly/2YN5GDX

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CONP / PCNO @NeuroLibre·

Sebastian Urchs is a recipient of the CONP Student Scholar Program 2019. Sebastian is a PhD student in the Integrated Program in Neuroscience @mcgillu working on an interactive, browser-based dashboard to improve quality control of brain imaging data. http://bit.ly/2YoevER

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500 Women Scientists - London ON @500WS_LondonON·

Congratulations @waltyelnats!! 🎉 https://twitter.com/NeuroLibre/status/1160916340623978496

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Ravi Menon @northernthrux·

Congratulations Olivia. Olivia is a Ph.D. student in my lab, using @WesternCFMM 's Siemens 7T MRI scanner to implement new techniques for layer fMRI. https://twitter.com/NeuroLibre/status/1160916340623978496

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BrainsCAN at Western @Brains_CAN·

Congrats to #WesternU's Olivia Stanley (@waltyelnats) who is a recipient of the @NeuroLibre CONP Student Scholar Program! @northernthrux @WesternCFMM https://twitter.com/NeuroLibre/status/1160916340623978496

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CONP / PCNO @NeuroLibre·

Olivia Stanley is a recipient of the CONP Student Scholar Program 2019. @waltyelnats is a Ph.D. student in Medical Biophysics @WesternU. Her project is to design a software platform allowing for easy inclusion of phase data in fMRI analysis. http://bit.ly/2KicVvq

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Naser Muja @nasermu·

@cmbrandes Awesome initiative. The Canadian Open Neuroscience community @NeuroLibre will be pleased to join the conversation. #clinicalOSlist

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CONP / PCNO @NeuroLibre·

Pauline Mouches is a recipient of the CONP Student Scholar Program 2019. She is a PhD student in Medical Image processing and Machine-learning @UCalgary. She is focusing on quantifying the evolution of subcortical and cerebrovascular structures in ageing http://bit.ly/2TduMXy

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CONP / PCNO @NeuroLibre·

Wennie Wu is a recipient of the CONP Student Scholar Program 2019. She is a Master’s student @UofT. Her project aims to better understand the underlying genetic causes of depressive disorders, providing guidance for future studies in depression. http://bit.ly/335zqv4

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Ravi Menon @northernthrux·

Jason works in the @WesternCFMM lab of Ali Khan (@neuroak) who is supported by @CRC_CRC and @Brains_CAN as well as @NSERC_CRSNG and @CIHR_IRSC https://twitter.com/NeuroLibre/status/1159139441086214145

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CONP / PCNO @NeuroLibre·

Jason Kai is a recipient of the CONP Student Scholar Program 2019. @jasonkai is a PhD candidate in Medical Biophysics @WesternU focussing on developing tools to study the brain's structural connectivity and on open resources. http://bit.ly/33ffnKU

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Dylan Roskams-Edris @DylanWRE·

Drafts of the Publication and Commercialization Policies I've been working on for the CONP are now available for perusal and comment.
Give them a read.
Let me know what you think. https://twitter.com/NeuroLibre/status/1157380479424892930

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Healthy Brains, Healthy Lives at McGill @HBHLMcGill·

Great article from @ThomasDurcan! #TommosaurusRex #openscience @SGClabNotebooks https://twitter.com/UA_magazine/status/1151152005865328647

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Jessica Royer @J_Royer_·

Very pleased to receive support from @NeuroLibre to work towards a better and more collaborative understanding of drug-resistant epilepsy with amazing groups led by @BorisBernhardt and Birgit Frauscher @TheNeuro_MNI https://twitter.com/NeuroLibre/status/1156584865023844352

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CONP / PCNO @NeuroLibre·

Jessica Royer is a recipient of the CONP Research Scholar Award 2019. @J_Royer_ is a clinical neuropsychologist Ph.D. student @mcgillu. Jessica is working on the first open data repository targeting drug-resistant epilepsy http://bit.ly/2XLTPX9

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CONP / PCNO @NeuroLibre·

With great data comes great responsibility!

A report from the @pintofscienceCA talk given by @Stikov in collaboration with @QBIN_RBIQ and @Estrid_J

http://bit.ly/2GAR4NO

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CONP / PCNO @NeuroLibre·

Gabriel Devenyi is a recipient of the CONP research Scholar Award 2019. @gadevenyi is a neuroimaging researcher @McGillU. He collects public images and processes them into meaningful measurements of human brain anatomy. http://bit.ly/2JHQ23b

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CONP / PCNO @NeuroLibre·

Ethan MacDonald is a recipient of the CONP research Scholar Award 2019. He is a postdoc @UCalgary. Ethan compares large open source imaging databases to investigate the effects of aging on the cerebral vasculature. http://bit.ly/2xORgEi

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CONP / PCNO @NeuroLibre·

CONP scholars and committee members @DylanWRE @adthoro @memar_sara and @LabScribbles are presenting their posters today @Sagebio - if you are attending today, you can drop by to check them out in the next break #sageassembly

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Quebec Bio-imaging Network @QBIN_RBIQ·

We are currently looking for eye-catching examples of bio-imaging for our new project, The Art of Imaging! If you are or know a scientist interested in showcasing your work, get in touch or check out our website for details and how to submit: https://www.rbiq-qbin.qc.ca/Call_for_images

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tim bussey @Timothy_Bussey·

Incredibly well-deserved. @memar_sara has built a database to allow the ~300 rodent #touchscreen labs to upload their data, subject it to QC, visualise it graphically, and combine and reanalyse with data from other labs. #OpenScience #Behaviour! @TouchScreenCog @Brains_CAN https://twitter.com/NeuroLibre/status/1154037832312209408

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CONP / PCNO @NeuroLibre·

Peer Herholz is a recipient of the CONP research Scholar Award 2019 working @TheNeuro_MNI. He is focusing on the creation of a complex open dataset targeting diverse aspects of auditory processing. http://bit.ly/2JHNSR7

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Graeme Moffat @graemedmoffat·

This year's @Baycrest brains are at Nathan Phillips Square for your perusal in support of @TheBrainProj. Go check them out, Toronto.

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TouchscreenCognition @TouchScreenCog·

Congrats to #WesternU @Brains_CAN's @memar_sara on this well-deserved award from the Canadian Open Neuroscience Platform (@NeuroLibre)! Sara developed #MouseBytes, an open access database for cognition, imaging and genomics data integration. https://mousebytes.ca/home #openscience https://twitter.com/NeuroLibre/status/1154037832312209408

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Zoha Deldar. PhD @Zoha_Deldar·

Excited to follow along and learn more about Sage Assembly tomorrow!
Assembly website: http://sageassembly.org

And huge congratulations @LabScribbles and @DylanWRE on your Young Investigator Awards.
http://sageassembly.org/agenda-m/young-investigators-awards/

@NeuroLibre
#openscience
#openneuroscience https://twitter.com/NeuroLibre/status/1154046678271315970

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BrainsCAN at Western @Brains_CAN·

Congratulations to @memar_sara, BrainsCAN Neuroinformatics Specialist, who is a recipient of the @NeuroLibre research Scholar Award! https://twitter.com/NeuroLibre/status/1154037832312209408

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CONP / PCNO @NeuroLibre·

CONP committee chairs and members @makalosma @DylanWRE and @LabScribbles will be attending Sage Assembly tomorrow hosted by @Sagebio in Seattle. You can follow along and see what's happening: Assembly website: http://sageassembly.org
Livestream link: https://www.youtube.com/watch?v=mztzRlGHSgA&feature=youtu.be

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CONP / PCNO @NeuroLibre·

Sara Memar is a recipient of the CONP research Scholar Award 2019. @memar_sara is a neuroinformatics researcher at @Brains_CAN. She is developing an open repository for cognitive behavioural, imaging and genomics data. http://bit.ly/2NTSHfu

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The Neuro @TheNeuro_MNI·

"#Hackerfest is important for #OpenScience because by proposing ideas to the community, we can work together to find innovative ways to solve some of the challenges we're working on," says @stronics. ℹ️ http://www.conp.ca/hackerfest-photos/ @StartupFest @neurolibre @MCINation #BetterTogether

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CONP / PCNO @NeuroLibre·

Pradeep Raamana is a recipient of the CONP research Scholar Award 2019. @raamana_ is a postdoc in medical image analysis and machine learning, working on developing standards and best practices in these areas. http://bit.ly/2YT05bZ

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CONP / PCNO @NeuroLibre·

The CONP was fortunate to be part of the HackerFest held during @startupfest and discuss challenges encountered in the process of building its platform. More pictures available on our website! http://bit.ly/2Oc57Q6

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CONP / PCNO @NeuroLibre·

Adrian Thorogood is a recipient of the CONP research Scholar Award 2019. @adthoro is a legal researcher specializing in how neuroscience research databases maximize data exchange while navigating various barriers. http://bit.ly/2Gc3H1C

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CONP / PCNO @NeuroLibre·

Uzair Hussain is a recipient of the CONP research Scholar Award 2019. He is a postdoc at @WesternU working on computational neuroimaging. His research focuses on modelling diffusion processes in the neocortex. http://bit.ly/2LSS6bm

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CONP / PCNO @NeuroLibre·

Mingli Zhang is a recipient of the CONP Scholar Award 2019. She is postdoctoral of @acehigh1952 @TheNeuro_MNI. Her research aims to create and evaluate population-based stratified neurology programs related to aging. http://bit.ly/2XKMeIj

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CONP / PCNO @NeuroLibre·

Michael Xiao is a recipient of the CONP Scholar Award 2019. @michaelxiao86 is researching movement disorders @UBC. He aims to establish open-source databases of event-triggered functional maps for sharing data and tools. http://bit.ly/2YU99xo

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CONP / PCNO @NeuroLibre·

"To cure brain diseases, neuroscientists must collaborate: That’s why I’m giving my lab’s standard methods away over the next year — making them available to anyone who would like to access them." Interesting piece from @ThomasDurcan #openscience

University Affairs@UA_magazine

To cure brain diseases, neuroscientists must collaborate: That’s why I’m giving my lab’s standard methods away over the next year — making them available to anyone who would like to access them. https://www.universityaffairs.ca/opinion/in-my-opinion/to-cure-brain-diseases-neuroscientists-must-collaborate-thats-why-im-giving-my-data-away/

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CONP / PCNO @NeuroLibre·

Luke Prince is a recipient of the @NeuroLibre Research Scholar Award 2019. @lukeyuriprince is a postdoc in the lab of @tyrell_turing. He aims to develop an algorithm that extracts rules for how brain cells work together. http://bit.ly/2Y6AEXi

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CONP / PCNO @NeuroLibre·

Congratulations to the CONP Research Scholar Award Winners: @lukeyuriprince, @michaelxiao86, Mingli Zhang, Uzair Hussain
@adthoro, @raamana_, @memar_sara, @peerherholz, Ethan MacDonald, @gadevenyi and @J_Royer_ http://bit.ly/32p5s4R

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CONP / PCNO @NeuroLibre·

The CONP had a great time at the HackerFest this weekend! #hackerfest

Krishna Chatpar@krishdaman

Closing out HackerFest @startupfest #hackerfest

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Kathryn Manning @kat_y_manning·

Excited that my painting has been awarded first place for the Canadian Open Neuroscience Platform @NeuroLibre art/photo contest! It has a lot of sentimental value and is currently hanging in @northernthrux 's office! @WesternCFMM @BMI_WesternU @CFREF_APOGEE

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Chris Holdgraf @choldgraf·

Hey @emdupre_ and @pierre_bellec++ y'all got a great shout out from @WillingCarol at the scipy keynote 😊

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Pradeep Reddy @raamana_·

Starting my day with a strong dose of #OpenScience😀.

@NeuroLibre --> the Canadian open #neuroscience program http://CONP.ca

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Krishna Chatpar @krishdaman·

If the mind-blowing potential of #Openscience keeps you up at night, this event is for you! https://www.eventbrite.ca/e/conp-hackerfest-2019-tickets-64404232794 #Startupfest #CONPatHackerfest @MILAMontreal @mcgillu @TheNeuro_MNI @startupfest @MCINation

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Pierre Bellec @pierre_bellec·

MTL BrainHack School Aug 5-30 will train participants in neuronal data science, at the interface of Neuroscience, Statistical modelling and Computer Science, using a project-based approach. Registration is open https://brainhackmtl.github.io/school2019/index.html

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Dylan Roskams-Edris @DylanWRE·

A little light bedside reading material.
With my mug from the Canadian Open Neuroscience Platform to make sure my brain stays open (& hydrated).

#scifi #philosophy #conp #reading #books

@gregeganSF @Annaleen @NeuroLibre

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Healthy Brains, Healthy Lives at McGill @HBHLMcGill·

We're so proud to have supported @emdupre_ with an HBHL Fellowship. Her brilliant research career is well underway! @HBHL_Trainees @NeuroLibre #OpenScience https://twitter.com/IPNMcGill/status/1148683337944502272

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CONP / PCNO @NeuroLibre·

Dans notre plus récente balado, @Stikov et Ben Inglis (@practiCalfMRI) parlent de la signification de l’entraide en science et se questionnent à savoir si les chercheurs qui partagent progressent plus rapidement. http://bit.ly/2NGjP1C

#pcno #scienceouverte

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CONP / PCNO @NeuroLibre·

In our newest podcast @Stikov and Ben Inglis (@practiCalfMRI) discuss what being helpful means in science, and whether researchers who share get ahead. http://bit.ly/30sfqkl

#conp #openscience

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Krishna Chatpar @krishdaman·

Do you want to build an open science tool? @NeuroLibre is hosting an open science hackathon at @startupfest hackerfest on July 12th at 6 PM. Registration and details here: https://www.eventbrite.ca/e/conp-hackerfest-2019-tickets-64404232794 #conpathackerfest #startupfest #openscience @mcgillu @MCINation @TheNeuro_MNI

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Nikola Stikov @Stikov·

Curious about Aperture, the new @OHBM publishing platform?

Come to our round table featuring @emdupre_ @jbpoline @DrBreaky @fMRI_today at noon in room Choir Studio. #ohbm2019

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Healthy Brains, Healthy Lives at McGill @HBHLMcGill·

Meet an exceptional group of scientists! @NeuroLibre @nasermu @LudmerCentre https://twitter.com/MCINation/status/1138048720635858945

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Healthy Brains, Healthy Lives at McGill @HBHLMcGill·

A pioneer in the field of neuroimaging, @HBHLMcGill Scientific Director, Alan C. Evans, has been honoured with the @OHBM 2019 Glass Brain Award: http://bit.ly/2ZcXzNr @LudmerCentre @TheNeuro_MNI @NeuroLibre
@mcgillu #OHBM2019 #OpenScience #Neuroscience

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Naser Muja @nasermu·

The Canadian Open Neuroscience Platform @NeuroLibre is excited to attend #OHBM2019 in Rome. Come visit Booth #26 to learn more about the CONP. Thanks to @OHBM for enduring and growing support of Open Science! I don't think any other org has such a trend.

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CONP / PCNO @NeuroLibre·

Mardi prochain, venez prendre un verre avec @Stikov, coprésident du comité de communications de @NeuroLibre, qui donnera une présentation sur les limites du système de publication actuel et des responsabilités qui viennent avec les grandes données! Infos : http://bit.ly/2LLeLb1

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CONP / PCNO @NeuroLibre·

Next Tuesday, come drink a pint with @Stikov, Co-chair of the @NeuroLibre Communications Committee, who will be giving a talk on the limitations of the current scientific publishing system and the responsibilities that come with big data! More info: http://bit.ly/2JmvMqd

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CONP / PCNO @NeuroLibre·

La révision par les pairs sert-elle à mettre une valeur sur les résultats de recherche? Ce processus régule-t-il les extrants universitaires? @LabScribbles en discute avec @jbpoline, président du Comité de pilotage de @NeuroLibre
#ScienceOuverte
https://conp.ca/conp-rachel-harding-and-jb-poline-on-open-science/

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CONP / PCNO @NeuroLibre·

Is peer review used to place value on research outputs? Does peer review function to gate-keep scholarly outputs?

@LabScribbles discusses with @jbpoline, chair of the @NeuroLibre Ethics and Governance Committee
#OpenScience
#OpenNeuroscience
#Podcast

https://conp.ca/conp-rachel-harding-and-jb-poline-on-open-science/

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CONP / PCNO @NeuroLibre·

We want to thank everybody who joined us for the #CONP2019 meeting in Toronto.

The future of #openscience is bright, in no small part thanks to the contributions of Canadian neuroscientists.

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CONP / PCNO @NeuroLibre·

We want to partner up with organizations that have an interest in #openscience. Stay tuned for collaborations with @pintofscienceCA @QBIN_RBIQ @OHBM #CONP2019

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CONP / PCNO @NeuroLibre·

The CONP podcast is reaching out to community thought leaders to contribute to the #openscience conversation

https://conp.ca/media/

We are looking for ideas and contributors, feel free to reach out to @LabScribbles or @Stikov

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CONP / PCNO @NeuroLibre·

For the last presentation of #CONP2019 Rachel Harding (@LabScribbles) co-chair of the CONP communications committee introduces our outreach and knowledge mobilization strategy

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CONP / PCNO @NeuroLibre·

CONP scholar Sara Memar Kouchehbagh (@memar_sara) introduces MouseBytes, an open access cognitive data integration and sharing platform at #CONP2019

Check it out:

https://mousebytes.ca/

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CONP / PCNO @NeuroLibre·

CONP scholar Pradeep Raamana (@raamana_) is developing standards and best practices for neuroimaging quality control #CONP2019

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Nikola Stikov @Stikov·

From scanner to publication

@agahkarakuzu from @PolyNeuro outlines our lab's vision for a transparent pipeline for quantitative MRI using @qmrlab

#CONP2019

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CONP / PCNO @NeuroLibre·

Currently PhD students jump through hurdles to acquire, process and publish #MRI data.

CONP scholar @agahkarakuzu presents a streamlined pipeline from scanner to publication #CONP2019

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CONP / PCNO @NeuroLibre·

Naser Muja (@nasermu) executive director of the CONP recaps day 1 of #CONP2019

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CONP / PCNO @NeuroLibre·

Naser thinks of our work so far as coming into three themes: 1) sustaining progress and platform growth, 2) vision for the future and platform identity, 3) data processing and dissemination #CONP2019

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CONP / PCNO @NeuroLibre·

Day 2 of the CONP annual meeting is now underway! @nasermu is recapping our achievements and all that was discussed yesterday. #CONP2019

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CONP / PCNO @NeuroLibre·

Now time for us all to digest this information and all the exciting talks and head to dinner! That's all for today folks, I will be back on twitter tomorrow for Day 2 of the First Annual CONP meeting! #CONP2019

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CONP / PCNO @NeuroLibre·

Lots of interesting questions raised in this session. Who will the users be now and in the future? What kind of datasets will they want to share & use? How do we future proof CONP? How do we leverage open science to accelerate science for the benefit of patients? #CONP2019

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Nikola Stikov @Stikov·

Rachel Harding (⁦@LabScribbles⁩) outlines the outreach strategy of the Canadian Open Neuroscience platform (⁦@NeuroLibre⁩). Content syndication and partnering with like-minded organizations should be a priority #CONP2019

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CONP / PCNO @NeuroLibre·

The reports from the breakout sessions have now come to a close so we now move to the day 1 closing comments - what a day!!
#CONP2019

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Pierre Bellec @pierre_bellec·

@Stikov @NeuroLibre @BrainCanada @ComputeCanada @calculquebec @ComputeOntario @emdupre_ @agahkarakuzu @_mattboud @dlq @jbpoline also HUGE thanks to @mybinderteam . At this stage, http://neurolibre.conp.ca is just a collection of links pointing to mybinder. Coming soon: a new binder hub based @ComputeCanada , with a new tool to import large datasets into a binder https://github.com/simexp/repo2data

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CONP / PCNO @NeuroLibre·

And finally, before we head to the breakout sessions, we hear from Dongsheng Xiao on his CONP scholarship project: NeuroMap database: An open resource of
event-triggered brain mesoscale maps in awake chronic mice #CONP2019

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CONP / PCNO @NeuroLibre·

Next up is Mingli Zhang from @mcgillu speaking about her research project: Multimodality computational modeling for
open neuroscience #CONP2019

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CONP / PCNO @NeuroLibre·

Next up we have talks from some of the CONP scholars - first up is Luke Prince from @UofT who will be talking about his project on nonlinear dynamic factor analysis of calcium fluorescence signals in neural populations #CONP2019

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CONP / PCNO @NeuroLibre·

There is a lot in the pipeline for the training committee to work in synergy with CONP and existing training infrastructure - we are all looking forward to hearing more soon #CONP2019

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CONP / PCNO @NeuroLibre·

Jane highlights the widened gender gap in the postdoctoral awardees and student awardees as an issue we should be aware of and work towards closing as CONP moves forward, unfortunately typical in postdoctoral awards though #CONP2019

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CONP / PCNO @NeuroLibre·

CONP scholars receive short-term awards to fund work across labs, sharing their findings openly, collaborating with CONP project and initiative leaders, helping craft the training programme as well as contributing and promoting CONP at a local level #CONP2019

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CONP / PCNO @NeuroLibre·

Jane is keen to train researchers to become neuroinformatically-competent future game changers! #CONP2019

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CONP / PCNO @NeuroLibre·

Jane describes the key skills for data driven discovery as data collection, analysis, management and tinkering (personal favourite) #CONP2019

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CONP / PCNO @NeuroLibre·

Back from the lunch break! We are now hearing from Jane Roskams on the professional development of open neuroscience scholars #CONP2019

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CONP / PCNO @NeuroLibre·

The Adrian-Dylan tag team are not finished yet - we now are getting a quick overview of the registered tier access model which will be implemented. Public tier will be via @ORCID_Org whilst registered tier will be via Edu Gain #CONP2019

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CONP / PCNO @NeuroLibre·

Dylan is now giving us a great run down and explanation of the different @creativecommons licenses which he is keen the CONP adopt or consider - right on! #CONP2019

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CONP / PCNO @NeuroLibre·

Adrian outlines the CONP terms of use are 3 tiered: 1) openness principle, 2) general terms of use and 3) resource-specific terms of use. This include a mandate for acknowledgement and citation, open licensing, no commercialisation directly of CONP data #CONP2019

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Nikola Stikov @Stikov·

@ProjectJupyter thank you for your amazing work and sorry for the appropriation, @agahkarakuzu is to blame for the acronym:) https://twitter.com/NeuroLibre/status/1122856743577329664

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CONP / PCNO @NeuroLibre·

For PREVENT-AD data to be open on CONP, explicit patient consent or complete anonymisation was required. More sensitive data e.g. MRI, is only be shared with qualified researchers. Adrian says they learned a lot from this process and hope to streamline in the future #CONP2019

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CONP / PCNO @NeuroLibre·

Now Adrian describes the core elements of Open Science by design. These considerations prioritise researcher integrity, autonomy, privacy security & safeguards, scope of use and access, inclusion and capacity, participant well-being, community engagement, accountability #CONP2019

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CONP / PCNO @NeuroLibre·

Dylan describes how outputs and shared resources hosted on CONP should adhere to clear open principles which he has been working on outlining. These include having openly licensed datasets which are free of patents which would limit innovation by others #CONP2019

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Estrid Jakobsen @Estrid_J·

Many of the problems we (neuroscientists) face when it comes to #OpenScience are unique to biomedical sciences and we have a lot to learn from other fields of research (I first discovered this through some confusing discussions with my astrophysicist father) #CONP2019 https://twitter.com/NeuroLibre/status/1122881219417370624

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CONP / PCNO @NeuroLibre·

The next talk on the schedule before the lunch break is the "Ethics of Open" which will be given by Adrian Thorogood and Dylan Roskams-Edris #CONP2019

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CONP / PCNO @NeuroLibre·

The range of datasets users were interested in contributing and accessing included imaging, histology, demographics, genomics, metabolomics, epigenetics, cognitive, neuropsych tracking, behavioural, clinical, animal histology - very diverse! #CONP2019

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CONP / PCNO @NeuroLibre·

In collaboration with Stephanie Dyke, an end user survey was conducted asking about different types and formats of data users would like to upload, access and use. As we might expect from a broad field like neuroscience, the data will likely be heterogeneous in nature #CONP2019

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CONP / PCNO @NeuroLibre·

As we often do in open science in biology, we can look to the work of physicists for inspiration in good open data practises! Large astrophysics datasets are shared and combined fairly routinely. Sean thinks we can take inspiration from these leaders in open scholarship #CONP2019

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CONP / PCNO @NeuroLibre·

Many specific use cases by end users have been raised and highlighted by Sean and his team. e.g. users often request larger datasets through the combination of multiple studies, incl. across provinces. Coherent metadata and annotation is critical in this situation. #CONP2019

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CONP / PCNO @NeuroLibre·

Interoperability of fully integrated data from studies such as PREVENT-AD, COMPASS-ND and ONDRI is an aim of CONP. This would allow for searches of specific or tailored cohort data and specific research questions to be asked and hopefully answered #CONP2019

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CONP / PCNO @NeuroLibre·

As we return from the break, Sean Hill @wake_sleep from @CAMHnews will be speaking on the end user requirements for open neuroscience workflows #CONP2019

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CONP / PCNO @NeuroLibre·

Lots of datasets are or will soon be live on CONP including PREVENT-AD, ABIDE & C-OPEN. Samir has an open science checklist if you want to share your dataset, to check its ready to be made open. This includes ethical considerations, automation, system compatibility etc #CONP2019

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CONP / PCNO @NeuroLibre·

Samir explains how he sees CONP as being for all of Canadian neuroscience - whether a researcher has a few brain scans or data from a large cohort study, the platform should be built for all in mind. #CONP2019

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Nikola Stikov @Stikov·

Big thank you to the team that is contributing to the @NeuroLibre publishing platform, and to @BrainCanada @ComputeCanada @calculquebec @ComputeOntario for the support

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CONP / PCNO @NeuroLibre·

The final talk of this session is from Samir Das who will be presenting on Open Datasets. Samir tells us how far open datasets have come in the last 15 years - no longer do we need to Fedex hard copies to repositories thank goodness! #CONP2019

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CONP / PCNO @NeuroLibre·

Boutiques is now being integrated in the CONP portal. 100+ tools are expected to be published by the end of the year - awesome! Find these guys on GitHub https://github.com/boutiques to give them feedback #CONP2019

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CONP / PCNO @NeuroLibre·

Now we are learning about tool Boutiques (also adhering to FAIR!). You can publish your pipelines/tools in Boutiques which archives in @ZENODO_ORG. Tools can then be tested and evaluated before being finalised and deployed #CONP2019

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CONP / PCNO @NeuroLibre·

CBRAIN is a global community with more than 800 users. These managed pipelines aspire to follow the FAIR principles (great to see all of these common themes clearly articulated across CONP) #CONP2019

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CONP / PCNO @NeuroLibre·

Up next are Tristan Glatard and Shawn Brown who will be discussing pipelines! #CONP2019

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CONP / PCNO @NeuroLibre·

Lots of interest in the room about NeuroLibre and the potential to partner with different publishers and other organisations, @stikov and @pierre_bellec are open to different models which would benefit the community and help project sustainability #CONP2019

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CONP / PCNO @NeuroLibre·

You can try out the demo use-cases today! Find NeuroLibre right here -> http://neurolibre.conp.ca Please try them out and give feedback to @Stikov and @pierre_bellec #CONP2019

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CONP / PCNO @NeuroLibre·

The NeuroLibre project is cloud based and allows processing of data in real-time in an interactive interface - this allows it to be used as a teaching tool, the "You can Teach" part of the JUPYTER acronym #CONP2019

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CONP / PCNO @NeuroLibre·

.@pierre_bellec shows how each section of the notebook has text, code and output from code execution. The notebook allows interactive real-time manipulation of the code and data. This could be used to demonstrate reproducibility of published outputs #CONP2019